CDS

Accession Number TCMCG016C09220
gbkey CDS
Protein Id OMO85979.1
Location join(1208..1400,1608..1651,1745..1837,2427..2516,2634..2735,3099..3245,3406..3525,3639..3698,4223..4320,4443..4584)
Organism Corchorus capsularis
locus_tag CCACVL1_09884

Protein

Length 362aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01009532.1
Definition hypothetical protein CCACVL1_09884 [Corchorus capsularis]
Locus_tag CCACVL1_09884

EGGNOG-MAPPER Annotation

COG_category S
Description Zinc finger CCCH domain-containing protein
KEGG_TC -
KEGG_Module M00387        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K10260        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04120        [VIEW IN KEGG]
map04120        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATTTTAACGGCGGCGGCAATAGGCGCGTCTTTAACCGACTCGGAGGTCCTTCAACCGCCCCAACCGACTCTTCCAAGAACCAGAAAGTTTGCTACCATTGGCAGGCGGGTAGGTGCAACCGTAACCCATGCCATTTCTTGCACCGCGAACTGCCTCTTCCTTCTTCCGCCGCCACCGCTAATGGATCAGGGGAAGGTTTTGCCTTGTTGAATCATCTTGATGGGCACCAGGAATTTGTTAGTGGAATTTCTTTGCCGGGGTTGGATAAGCTCTATACGGGGAGTAAAGATGGTACTGTGAGGGCTTGGGATACCAGTTCTGGTCAGTGTATGGGTGTGATTAATCTTGGTGGCGAAGTAGGTTGCATGATTAGTGAAGGTCCTTGGCTGTTTGTTGGCATACCGAATTTTGTCAAGGCATGGAACACCCAAACTAACGCTGAACTCAGTCTTAGTGGACCTGTTGGACAAGTCTATGCCATGGTTGTGGGTAATGATTTGCTCTTCGCAGGATCGCAGGATGGGACAATATTAGCATGGAAATTTAATGCTGTCACCAATAACTTTGAACCAGCAGCATCACTTAAAGGTCATACCCTTGCAGTTGTATCATTAGTTGTTGGAGCTAATAGATTATACTCTGGTTCTGTGGACCATTCTATAAAGGTTTGGAGCCTGGAAACTTTGCAGTGTCTACAAACTCTGACAGAACACACTAATGTTGTGATGTCCTTGCTATGCTGGGAACAATTTCTTTTATCATGTTCATTGGACCAAACAATTAAGGTGTGGGTAGCGACCGAGAATGGAAACTTGGAAGTAACATACACTCACAATGAGGAACATGGCCTGCTTATTCTTCGTGGAATGCATGACATGGAATCCAAGCCAATATTGCTGTGCGTATGCAATGACAATTCTGTTCGACTCTATGATCTGCCATCATTTTCGGAGAAGGGTAAAATTTTTGCTAAGCAGGAGATTCGTGCCATTGAGGTAGGCCCTAGTGGCCTGTTTTTCACTGGAGATGGAACAGGGTTTAAAGTGTGGAAATGGGCAGAAGCAAAAGCAATTGCCACATCCTGA
Protein:  
MDFNGGGNRRVFNRLGGPSTAPTDSSKNQKVCYHWQAGRCNRNPCHFLHRELPLPSSAATANGSGEGFALLNHLDGHQEFVSGISLPGLDKLYTGSKDGTVRAWDTSSGQCMGVINLGGEVGCMISEGPWLFVGIPNFVKAWNTQTNAELSLSGPVGQVYAMVVGNDLLFAGSQDGTILAWKFNAVTNNFEPAASLKGHTLAVVSLVVGANRLYSGSVDHSIKVWSLETLQCLQTLTEHTNVVMSLLCWEQFLLSCSLDQTIKVWVATENGNLEVTYTHNEEHGLLILRGMHDMESKPILLCVCNDNSVRLYDLPSFSEKGKIFAKQEIRAIEVGPSGLFFTGDGTGFKVWKWAEAKAIATS